Message of the Day.
A course on "Computational Analysis of Ultra-High-Throughput (UHT) Sequencing Data"
will use the Vital-IT infrastructure from the:
13th Sep. 2010 until the 17th Sep. 2010.
The load on our computing infrastructure may be higher during this time.
Please contact us if you need more information.
(VF, 05.08.2010)
Publications
Dominiczak AF, Herget-Rosenthal S, Delles C, Fliser D, Fournier I, Graber A, Girolami M, Holmes E, Lang F, Molina F, Nicholson J, Remuzzi G, Rossing P, Rudolph KL, Wolkenhauer O, Xenarios I, Zubarev R, Zubov D, Vlahou A, Schanstra JP.
"Systems biology to battle vascular disease.", Nephrol Dial Transplant, 25(4) : 1019-1022 (2010).
The Gene Ontology Consortium.
" The Gene Ontology in 2010: extensions and refinements.", Nucleic Acids Research, 38 : D331-D335 (2010).
Guex N, Migliavacca E, Xenarios I.
"Multiple imputations applied to the DREAM3 phosphoproteomics challenge: a winning strategy.", PLoS One, 5(1) : e8012 (2010).
Hinz U, UniProt Consortium.
"From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase., Cellular and Molecular Life Sciences, 67(7) : 1049-1064 (2010).
Hor H, Kutalik Z, Dauvilliers Y, Valsesia A, Lammers GJ, Donjacour CE, Iranzo A, Santamaria J, Peraita Adrados R, Vicario JL, Overeem S, Arnulf I, Theodorou I, Jennum P, Knudsen S, Bassetti C, Mathis J, Lecendreux M, Mayer G, Geisler P, Benetó A, Petit B, Pfister C, Bürki JV, Didelot G, Billiard M, Ercilla G, Verduijn W, Claas FH, Vollenwider P, Waeber G, Waterworth DM, Mooser V, Heinzer R, Beckmann JS, Bergmann S, Tafti M.
" Genome-wide association study identifies new HLA class II haplotypes strongly protective against narcolepsy.", Nature Genetics, (2010).
Jungo F, Estreicher A, Bairoch A, Bougueleret L, Xenarios I.
"Animal Toxins: How is Complexity Represented in Databases?", Toxins, 2(2) : 262-282 (2010).
Kapur K, Johnson T, Beckmann ND, Sehmi J, Tanaka T, Kutalik Z, Styrkarsdottir U, Zhang W, Marek D, Gudbjartsson DF, Milaneschi Y, Holm H, Diiorio A, Waterworth D, Li Y, Singleton AB, Bjornsdottir US, Sigurdsson G, Hernandez DG, Desilva R, Elliott P, Eyjolfsson GI, Guralnik JM, Scott J, Thorsteinsdottir U, Bandinelli S, Chambers J, Stefansson K, Waeber G, Ferrucci L, Kooner JS, Mooser V, Vollenweider P, Beckmann JS, Bochud M, Bergmann S.
"Genome-wide meta-analysis for serum calcium identifies significantly associated SNPs near the calcium-sensing receptor (CASR) gene., Plos Genetics, 6(7) :(2010).
Liechti R, Gleizes A, Kuznetsov D, Bougueleret L, Le Mercier Ph, Bairoch A and Xenarios I.
"OpenFluDB, a database for human and animal influenza virus.", Database, 2010(baq004) : (2010).
Santuari L, Pradervand S, Amiguet-Vercher AM, Thomas J, Dorcey E, Harshman K, Xenarios I, Juenger TE, Hardtke CS.
"Substantial deletion overlap among divergent Arabidopsis genomes revealed by intersection of short reads and tiling arrays.", Genome Biology, 11(1) : R4 (2010).
Schüpbach T, Zoete V, Tsakam-Sotché B, Michielin O.
"Fourier transform convolution integrals applied to generalized Born molecular volume.", Journal of Computational Chemistry, 31(3) : 649-59 (2010).
Schüpbach T, Xenarios I, Bergmann S, Kapur K.
"FastEpistasis: a high performance computing solution for quantitative trait epistasis.", Bioinformatics, 26(11) : 1468-1469 (2010).
Wang J, Chen P-J , Wang G-J, Keller L.
" Chromosome Size Differences May Affect Meiosis and Genome Size.
", Science, 329( 5989) : 293 (2010).